BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026C11SP1|AL428527
(816 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig324 1330 0.0
>3x_Contig324
Length = 1753
Score = 1330 bits (663), Expect = 0.0
Identities = 692/707 (97%), Gaps = 2/707 (0%)
Strand = Plus / Plus
Query: 1 gtatcttcctttcagaaattgaagaccgattcatatggtgaaattcttgaattggatgta 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1049 gtatcttcctttcagaaattgaagaccgattcatatggtgaaattct-gaattggatgta 1107
Query: 61 ccagttggacgatctaatactttctcacttaaagttggcaactktyaagtgtatggatgg 120
||||||||||||||||||||||||||||||||||||||||||| | ||| | ||||||||
Sbjct: 1108 ccagttggacgatctaatactttctcacttaaagttggcaactgtcaag-gaatggatgg 1166
Query: 121 tagtatcacaattactcgaaggattttcatatgaatctttatcatctcttttcamatatt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1167 tagtatcacaattactcgaaggattttcatatgaatctttatcatctcttttcaaatatt 1226
Query: 181 cccaattggatcatagttactcccagatcacttctggtaacgcacatcctgatgatcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1227 cccaattggatcatagttactcccagatcacttctggtaacgcacatcctgatgatcttg 1286
Query: 241 aaattgttaacgttttcacatggttggcttccttagtgaacgggcgtgaagaatcactgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1287 aaattgttaacgttttcacatggttggcttccttagtgaacgggcgtgaagaatcactgt 1346
Query: 301 ttaamaagcttccttactctattcmmttgatcacmaatcttcatatctcgttgaccaact 360
|||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 1347 ttaaaaagcttccttactctattcaattgatcacaaatcttcatatctcgttgaccaact 1406
Query: 361 ttyttgtggttcaaattgctcaacttgaaaaaacttatgaatcccgccttgaaacctgtt 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1407 tttttgtggttcaaattgctcaacttgaaaaaacttatgaatcccgccttgaaacctgtt 1466
Query: 421 gcattattttgcagatgcttggtttttctcgttacaaaaactcttctattgayctattcc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1467 gcattattttgcagatgcttggtttttctcgttacaaaaactcttctattgatctattcc 1526
Query: 481 magcmactactgattcgggctcgactatatctccacatttaccgtcgttcatagaatcgg 540
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1527 aagcaactactgattcgggctcgactatatctccacatttaccgtcgttcatagaatcgg 1586
Query: 541 ctctgataaattccattctgtcgccggaatctcggaagtttgaaatttcatggaaaaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1587 ctctgataaattccattctgtcgccggaatctcggaagtttgaaatttcatggaaaaatg 1646
Query: 601 ctagcgaaaagcttggtaatacaacttccttaaaaagtgtttacaatatcttggactgtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1647 ctagcgaaaagcttggtaatacaacttccttaaaaagtgtttacaatatcttggactgtg 1706
Query: 661 tggatgcaagtatcaaaaaatttattgaatttgatggrattgctcct 707
||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1707 tggatgcaagtatcaaaaaatttattgaatttgatggaattgctcct 1753
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6094
Number of Sequences: 1807
Number of extensions: 6094
Number of successful extensions: 133
Number of sequences better than 1.0e-20: 1
length of query: 816
length of database: 10,358,551
effective HSP length: 16
effective length of query: 800
effective length of database: 10,329,639
effective search space: 8263711200
effective search space used: 8263711200
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)